Package: BEDMatrix 2.0.4

Alexander Grueneberg

BEDMatrix: Extract Genotypes from a PLINK .bed File

A matrix-like data structure that allows for efficient, convenient, and scalable subsetting of binary genotype/phenotype files generated by PLINK (<https://www.cog-genomics.org/plink2>), the whole genome association analysis toolset, without loading the entire file into memory.

Authors:Alexander Grueneberg [aut, cre], Gustavo de los Campos [ctb]

BEDMatrix_2.0.4.tar.gz
BEDMatrix_2.0.4.zip(r-4.7)BEDMatrix_2.0.4.zip(r-4.6)BEDMatrix_2.0.4.zip(r-4.5)
BEDMatrix_2.0.4.tgz(r-4.6-x86_64)BEDMatrix_2.0.4.tgz(r-4.6-arm64)BEDMatrix_2.0.4.tgz(r-4.5-x86_64)BEDMatrix_2.0.4.tgz(r-4.5-arm64)
BEDMatrix_2.0.4.tar.gz(r-4.7-arm64)BEDMatrix_2.0.4.tar.gz(r-4.7-x86_64)BEDMatrix_2.0.4.tar.gz(r-4.6-arm64)BEDMatrix_2.0.4.tar.gz(r-4.6-x86_64)
BEDMatrix_2.0.4.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
BEDMatrix/json (API)

# Install 'BEDMatrix' in R:
install.packages('BEDMatrix', repos = c('https://quantgen.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/quantgen/bedmatrix/issues

On CRAN:

Conda:

bedgeneticsgenomicsplinkplink2r-pkg

7.52 score 19 stars 10 packages 303 scripts 1.3k downloads 3 mentions 2 exports 1 dependencies

Last updated from:bfd3842231. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK110
linux-devel-x86_64OK106
source / vignettesOK158
linux-release-arm64OK114
linux-release-x86_64OK117
macos-release-arm64OK70
macos-release-x86_64OK247
macos-oldrel-arm64OK83
macos-oldrel-x86_64OK218
windows-develOK69
windows-releaseOK76
windows-oldrelOK74
wasm-releaseOK106

Exports:BEDMatrixshow

Dependencies:crochet